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Table 2 Specific contrasts

From: Anti-inflammatory effects of tetradecylthioacetic acid (TTA) in macrophage-like cells from Atlantic salmon (Salmo salar L.)

Contrast H0 to test Interpretation when H0 is rejected and the corresponding log2FC passes the cut-off
preTTA vs. CTR H0 : P TTA = P contr DE in: Samples pretreated with TTA vs. pretreatment Control
TTA vs. CTR H0 : T TTA = T contr DE in: Samples treated with TTA vs. Control treated
TTAIC vs. CTR H0 : T TTA +polyI:C= T contr DE in: Samples treated with TTA+poly(I:C) vs. Control treated
IC vs. CTR H0 : T polyI :C= T contr DE in: Samples treated with poly(I:C) vs. Control treated
IC vs. TTAIC H0 : T TTA +polyI:C= T polyI :C DE in: Samples treated with TTA+poly(I:C) vs. poly(I:C) treated
  1. Contrasts, extracted for each probe after the full linear model (Equation 2) was fitted to the data.