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Table 1 Primers and probes used in the experiments

From: Selectively enhanced expression of prophenoloxidase activating enzyme 1 (PPAE1) at a bacteria clearance site in the white shrimp, Litopenaeus vannamei

Name

Nucleotide sequence

Note

dsEGFPf

5'-GAATTAATACGACTCACTATAGGGAGACGTGACCACCCTGACCTA-3'

RNAi control forward primer

dsEGFPr

5'-GAATTAATACGACTCACTATAGGGAGAATGCCGTTCTTCTGCTTG-3'

RNAi control reverse primer

lvPPAERACE3'

5'-AGTCACATYCTYACKGCYGCSCACTG-3'

3' RACE primer

lvPPAERACE5'

5'-GGTCGAAGCCGTCAACGCAGTGC-3'

5' RACE primer

dslvPPAEf

5'-GAATTAATACGACTCACTATAGGGAGACTTCCGTCCTTCCAACAAT-3'

dsRNA production forward primer

dslvPPAEr

5'-GAATTAATACGACTCACTATAGGGAGAGCCTCTTGGCGATCAGTC-3'

dsRNA production forward primer

qRTPPAEf

5'-AGTTCCTACGACACGACCACCTA-3'

qRT-PCR PPAE1 forward primer

qRTPPAEr

5'-TCGACGTTGAAGTTGGTGCTT-3'

qRT-PCR PPAE1 reverse primer

qRTPPAEp

5'-AACGACATCGCCATCATCAAGCTGC-3'

qRT-PCR probe

qRTβf

5'-CGAGGTATCCTCACCCTGAAAT-3'

qRT-PCR β-actin forward primer

qRTβr

5'-GTGATGCCAGATCTTCTCCATGT-3'

qRT-PCR β-actin reverse primer

qRTβp

5'-CGAGCACGGCATCGTCACCAA-3'

qRT-PCR β-actin probe

qRT18sf

5'-TGCTCAGAGCAGGCTGGTTT-3'

qRT-PCR 18s forward primer

qRT18sr

5'-GAGGTCCTGTTCCAATCATTCCA-3'

qRT-PCR 18s reverse primer

qRT18sp

5'-TGCTTACAGCCCGAATGGTCGTGC-3'

qRT-PCR 18s probe