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Table 2 Genes responsive to LPS that do not contain putative κB in their upstream sequences

From: Transcriptional profiling of the LPS induced NF-κB response in macrophages

Accession No Symbol Gene Name
Chemokines and receptors
[genebank:NM_021006] CCL3L1 Chemokine, CC motif, ligand 3-like protein 1 π #
[genebank:NM_002988] CCL18 Chemokine, CC motif, ligand 18
[genebank:NM_005623] CCL8 Chemokine, CC motif, ligand 8 π #
[genebank:NM_002991] CCL24 Chemokine, CC motif, ligand 24 #
[genebank:NM_001838] CCR7 Chemokine, CC motif, receptor 7 #
[genebank:NM_002620] PF4V1 Platlet Factor 4, variant 1
Angiogenesis
[genebank:NM_003246] THBS1 Thrombospondin 1 #
[genebank:NM_012484] HMMR Hyaluronan-mediated motility receptor #
Cytokines and Receptors   
[genebank:NM_003853] IL18 RAP Interleukin 18 receptor accessory protein #
[genebank:NM_000565] IL6R Interleukin 6 receptor #
Apoptosis
[genebank:U75285] AIP4 Apoptosis inhibitor 4 (survivin)
[genebank:NM_021127] PMAIP1 Phorbol 12 myristate 13 acetate induced protein 1 *#
[genebank:NM_014456] PDC4 Programmed cell death 4 π
[genebank:X75252] PBP Prostatic binding protein #
Transcription
[genebank:NM_001211] BUB1β Budding uninhibited by benzimidazoles 1, S. Cerevisiae homolog of B π#
[genebank:X52317] H2FAZ H2A histone family member Z
[genebank:NM_002128] HMGB1 High mobility group box 1
[genebank:NM_006618] JARID1B Jumonji, AT-rich interactive domain 1B π #
[genebank:NM_006347] PPIH Peptidyl-prolyl isomerase H #
[genebank:NM_005030] PLK1 Polo-like kinase #
[genebank:NM_001067] TOP2a Topoisomerase, DNA, 11, α π
Growth
[genebank:NM_000222] KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
Miscellaneous
[genebank:NM_019111] HLADRα Major histocompatibilty complex, class II, DR α π
[genebank:D14657]   K1AA0247 #
[genebank:NM_006062] SMYD5 SMYD family member 5 π
  1. π Indicates those genes validated using real time PCR. # Indicates those genes that contain putative IRF-3 sites [see Additional file 1 for position].