From: Transcriptional profiling of the LPS induced NF-κB response in macrophages
Microarray | Taqman | |||
---|---|---|---|---|
Gene | 1 hr LPS | 4 hr LPS | 1 hr LPS | 4 hr LPS |
Chemokines and receptors | ||||
CCL3 | 5.744 | 2.200 | 1622 (± 322) | 141 (± 27) |
CCL3L1 | 5.708 | 2.603 | 56 (± 3) | 4 (± 1) |
CCL4 | 4.769 | 3.399 | 7047 (± 836) | 2481 (± 714) |
CCL8 * | 1.859 | NC | 8 (± 2) | 94 (± 38) |
CCL22 | NC | 4.021 | NC | 135 (± 28) |
CXCL1 * | 1.272 | NC | 258 (± 41) | 250 (± 21) |
CXCL2 | 3.938 | 2.787 | 243 (± 85) | 68 (± 13) |
CXCL8 * | NC | 1.957 | 1016 (± 57) | 491 (± 56) |
CXCR4 | NC | -1.493 | NC | -4 (± 1) |
Cytokines and receptors | ||||
IL-1β | 4.649 | 4.289 | 3490 (± 254) | 1891 (± 135) |
IL-1RN * | NC | 1.830 | 4 | 6 (± 2) |
PBEF | 1.008 | 3.029 | 5 (± 2) | 19 (± 1) |
TNF-α | 4.808 | 2.116 | 392 (± 55) | 39 (± 4) |
Stress | ||||
COX-2 | 3.673 | 1.333 | 166 (± 34) | 29 (± 8) |
SOD2 | 4.433 | 5.620 | 44 (± 7) | 264 (± 37) |
TXNIP | -3.757 | -1.638 | -11 (± 2) | -2 (± 1) |
Apoptosis | ||||
cIAP2 * | NC | 1.151 | 19 (± 3) | 112 (± 11) |
GADD45β | 1.212 | 1.323 | 7 (± 1) | 8 (± 1) |
PDCD4 | NC | -1.048 | NC | -7 (± 1) |
PMAIP1 | 2.604 | NC | 7 (± 1) | NC |
TNFAIP3 | 2.905 | 2.526 | 104 (± 17) | 44 (± 8) |
Transcription | ||||
C-MYB | NC | -1.584 | NC | -5 (± 1) |
TOP2α | NC | -1.561 | NC | -3 |
C-REL * | NC | 2.869 | 4 (± 1) | 38 (± 3) |
IκB-α | 4.024 | 3.006 | 40 (± 4) | 19 (± 2) |
NFκB1 | 1.150 | 3.427 | 4 (± 1) | 36 (± 2) |
Cell cycle and Differentiation | ||||
BTG2 * | 2.023 | NC | 116 (± 21) | 32 (± 7) |
BUB1β | NC | -1.244 | NC | -3 |
ID2 | NC | 1.299 | NC | 4 (± 1) |
JARID1B π | 2.675 | 4.061 | NC | NC |
Growth | ||||
IGFBP3 * | NC | 4.182 | 43 (± 9) | 1420 (± 167) |
Adhesion | ||||
ICAM1 * | NC | 1.188 | 6 | 70 (± 44) |
Miscellaneous | ||||
HLA-DRα π | NC | 1.593 | NC | NC |
SMYD5 π | 3.699 | 2.417 | NC | NC |