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Figure 6 | BMC Immunology

Figure 6

From: Immunological hotspots analyzed by docking simulations: evidence for a general mechanism in pemphigus vulgaris pathology and transformation

Figure 6

Generation of Dsg1 and Dsg3 peptide sequences for docking into DRB1*0402. Overlapping 15 mer peptides are generated from the Dsg1 and Dsg3 sequences. For each 15 mer peptide, an overlapping sliding window of size nine is applied to generate all combinations of binding registers to be modeled into the binding groove of DRB1*0402.

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BMC Immunology

ISSN: 1471-2172

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