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Table 3 Repertoire analysis of the RAGD dataset from IJspeert et al.[9]

From: ImmunoGlobulin galaxy (IGGalaxy) for simple determination and quantitation of immunoglobulin heavy chain rearrangements from NGS

Samples

All sequences

Unique sequences

Unproductive

Productive

Control BM

35800

18553 (51.8)

9198 (25.7)

26602 (74.3)

P16 BM

12166

3282 (27)

2812 (23.1)

9354 (76.9)

Control PB

18901

11912 (63)

5043 (26.7)

13858 (73.3)

P15 PB

16080

7667 (47.7)

2433 (15.1)

14375 (89.4)

P16 PB

14543

3712 (25.5)

2126 (14.6)

12417 (85.4)

P18 PB

25093

3656 (14.6)

4421 (17.6)

20672 (82.4)

  1. Unproductive = non- functional sequences and productive = functional sequences as determined with IgBLAST. PB = peripheral blood, BM = bone marrow, control = unaffected individual.