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Table 3 Disease associated genes in different categories and pathways

From: In silico analysis of autoimmune diseases and genetic relationships to vaccination against infectious diseases

 

Rheumatoid arthritis

Systemic lupus erythematosus

Immune thrombocytopenic purpura

Guillain-barre syndrome

Number of Genes Associated >>

667

448

49

73

v Categories v

    

Antigen Processing & Presentation

6.30%

9.15%

14.29%

8.22%

Antimicrobials

19.64%

17.19%

28.57%

39.73%

BCR Signaling Pathway

2.85%

2.23%

6.12%

4.11%

Cytokines + Receptors

28.49%

18.97%

30.61%

24.66%

> Chemokines + Receptors

7.05%

3.79%

4.08%

5.48%

> Interferons + Receptors

0.30%

0.67%

4.08%

4.11%

> Interleukins + Receptors

5.55%

4.02%

8.16%

5.48%

> TGF-b Family Members + Receptors

1.20%

0.45%

2.04%

2.74%

> TNF Family Members + Receptors

3.00%

2.90%

4.08%

1.37%

Natural Killer Cell Cytotoxicity

6.45%

6.47%

12.24%

9.59%

TCR Signaling Pathway

4.50%

4.46%

10.20%

10.96%

Other Immune-Related

28.94%

29.46%

34.69%

19.18%

Immune Disease Pathways

19.34%

31.47%

38.78%

28.77%

Infectious Disease Pathways

28.79%

29.46%

34.69%

45.21%

Unclassified

16.49%

19.20%

8.16%

17.81%

  1. Chemokine’s and their receptors were grouped together. Percentages do not sum to 100% as categories can overlap. Bold numbers indicate significant results using Fishers exact test with Bonferroni correction. Data is in Additional files 1 and 9.