In silico prediction of Ebola Zaire GP1,2 immuno-dominant epitopes for the Balb/c mouse

BMC Immunology

Table 1 In silico predictions of Ebola Zaire GP_1,2 epitopes

Protein sequence	Start position	Peptide	BIMAS	SYFPEITHI
Protein sequence	Start position	Peptide	Score	Score
Ebola Zaire GP	231	EYLFEVDNL	4000	23
676 AA	231	(P8)	4000	23
	571	LFLRATTEL	1920	25
	571	(P9)	1920	25
NCBI Accession number Q05320.1	161	LYDRLASTV	600	22
NCBI Accession number Q05320.1	161	(P10)	600	22

GP_1,2 from Ebola Zaire was analyzed both by BIMAS and SYFPEITHI. Nonomer peptides that scored greater or equal to 150 on BIMAS and 22 on SYFPEITHI were subjected to further evaluation

ISSN: 1471-2172