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Table 7 Genes associated with mitochondrial function identified to be regulated by IL-10 in monocytes stimulated by N. meningitidis

From: Transcriptomic data from two primary cell models stimulating human monocytes suggest inhibition of oxidative phosphorylation and mitochondrial function by N. meningitidis which is partially up-regulated by IL-10

Symbol

Entrez gene name

Location

Type(s)

Fold change1

 

Nm vs ctr

Nm + IL-10 vs ctr

Nm + IL-10 vs Nm

ACO2

aconitase 2, mitochondrial

Cytoplasm

Enzyme

−1.66

−1.33

1.25

ATP5A1

ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle

Cytoplasm

Transporter

−1.83

−1.34

1.37

ATP5H

ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d

Cytoplasm

Enzyme

−1.50

−1.18

1.27

BCL2

B-cell CLL/lymphoma 2

Cytoplasm

Transporter

NC

NC

−1.46

CASP3

caspase 3, apoptosis-related cysteine peptidase

Cytoplasm

Peptidase

NC

1.86

1.79

COX7C

cytochrome c oxidase subunit VIIc

Cytoplasm

Enzyme

−1.66

NC

1.45

CYB5A

cytochrome b5 type A (microsomal)

Cytoplasm

Enzyme

−1.69

NC

1.48

FURIN

furin (paired basic amino acid cleaving enzyme)

Cytoplasm

Peptidase

−2.47

1.42

3.51

NCSTN

nicastrin

Plasma Membrane

Peptidase

−1.41

1.17

1.21

NDUFA6

NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14 kDa

Cytoplasm

Enzyme

−2.00

−1.53

1.31

NDUFA9

NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39 kDa

Cytoplasm

Enzyme

1.28

3.10

2.43

NDUFA10

NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42 kDa

Cytoplasm

Transporter

−1.38

−1.14

1.22

NDUFAB1

NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8 kDa

Cytoplasm

Enzyme

−2.26

−1.56

1.45

NDUFB5

NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16 kDa

Cytoplasm

Enzyme

−1.48

NC

1.37

NDUFS2

NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49 kDa (NADH-coenzyme Q reductase)

Cytoplasm

Enzyme

−2.04

NC

1.92

NDUFS6

NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13 kDa (NADH-coenzyme Q reductase)

Cytoplasm

Enzyme

−1.74

−1.42

1.22

NDUFV2

NADH dehydrogenase (ubiquinone) flavoprotein 2, 24 kDa

Cytoplasm

Enzyme

NC

−1.61

−1.44

PRDX3

peroxiredoxin 3

Cytoplasm

Enzyme

−1.63

NC

1.47

SDHB

succinate dehydrogenase complex, subunit B, iron sulfur (Ip)

Cytoplasm

Enzyme

−1.91

−1.41

1.35

TRAK1

trafficking protein, kinesin binding 1

Nucleus

Other

−1.29

NC

1.25

UCP2

uncoupling protein 2 (mitochondrial, proton carrier)

Cytoplasm

Transporter

−2.07

−1.49

1.39

UQCR10

ubiquinol-cytochrome c reductase, complex III subunit X

Cytoplasm

Enzyme

−1.75

−1.38

1.26

VPS9D1

VPS9 domain containing 1

Other

Transporter

NC

NC

1.86

  1. 1Significantly expressed genes identified with two-way ANOVA, P < 0.05 after correction for multiple testing using the Benjamini-Hochberg method for correcting the false discovery rate [36]. NC denotes P-value >0.05