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Table 2 Summary of datasets used in this study

From: Cattle infection response network and its functional modules

Experiment

arraysa

Infection typeb

Tissuec

E-MEXP-1778

120

T.congolense

Liver (80), Lymph (20), Spleen (20)

GSE24560

50

E.coli (26), S.aureus (24)

Mammary gland

GSE35185

41

M.avium

Macrophages

GSE25319

40

E.coli

Liver

GSE10695

27

E.coli

Mammary gland

GSE25413

24

E.coli

Mammary gland

GSE24217

23

E.coli

Mammary gland

E-TABM-878

23

Salmonella

Macrophages

GSE33309

21

M.bovis

Macrophages

GSE15025

15

E.coli

Mammary gland

GSE33359

8

M.bovis

Leukocytes

GSE50685

3

E.coli

Mammary gland

  1. aNumber of infected arrays using Affymetrix Genechip Bovine Genome Array platform
  2. b,cValues in parenthesis correspond to the number of arrays for each experiment