Table 1 Recombination signal sequences (RSS) of Bos Taurus IGHD regions from clusters 2–4
From: Formation of ultralong DH regions through genomic rearrangement
5′ RSS (heptamer spacer nonamer) | IGHD | Cluster | 3′ RSS (heptamer spacer nonamer) |
|---|---|---|---|
ggattttgagggtgtgcgtgtcaccctg | IGHD1–2 | 2 | cacagtgactcaggccctgacataaagt |
ggattttgagggtgtgcgtgtcaccgtg | IGHD1–3 | 3 | cacagtgactcaggccctgacataaagt |
ggattttgagggtgtgcgtgtcaccgtg | IGHD1–4 | 4 | cacagtgactcaggccctgacataaagt |
gctttttgccaagggctctactgcggtg | IGHD2–2 | 2 | cacagtgagacatggggcagcaaaccct |
gctttttgccaagggctctactgcggtg | IGHD2–3 | 3 | cacagtgagacatggggcagcaaaccct |
gctttttgccaagggctctactgcggtg | IGHD2–4 | 4 | cacagtgagacatggggcagcaaaccct |
ggtttctgatgccggctgtgtcacggtg | IGHD3–3 | 3 | cacagtgacactgtccaggacagaaacc |
ggtttctgatgccggctgtgtcacggtg | IGHD3–4 | 4 | cacagtgacactgtccaggacagaaacc |
ggtttttgatgccggctgtgtcacggtg | IGHD7–3 | 3 | cacagtgatactctctgggacaaaaacc |
ggtttttgatgccggctgtgtcacggtg | IGHD7–4 | 4 | cacagtgatactctctgggacaaaaacc |
ggtttctgatgccggctgtgtcacggtg | IGHD8–2 | 2 | cacagtgatactctctgggacaaaaacc |
ggtttctgatgccggctgtgttgtggtg | IGHD5–2 | 2 | cacagtgatgctctcagtgtcagaaacc |
ggtttctgatgccggctgtgttgtggtg | IGHD5–3 | 3 | cacagtgacgctctcagtgtcagaaacc |
ggtttctgatgccggctgtgttgtggtg | IGHD5–4 | 4 | cacagtgacgctctcagtgtcagaaacc |
ggtttctgatgccggctgtgtcacggtg | IGHD6–2 | 2 | cacagtgacactctctgggacaaaaacc |
ggtttctgatgccagctgtgtcacggtg | IGHD6–3 | 3 | cacagtgacactctctgggacaaaaacc |
ggtttctgatgccagctgtgtcacggtg | IGHD6–4 | 4 | cacagtgacactctctgggacaaaaacc |