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Table 2 Assignment of VDJ by either the IMGT or igBLAST for the 283 sequences which are not assigned as the same VDJ compared with the S22 genotype

From: ImmunoGlobulin galaxy (IGGalaxy) for simple determination and quantitation of immunoglobulin heavy chain rearrangements from NGS

Method

IGHV

IGHD

IGHJ

Total

IMGT

0.48

5.45

0.00

5.93

igBLAST

0.75

4.55

0.40

5.70

  1. The values represent the % errors compared to the total number of reads assigned to the golden standard S22 genotype.
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BMC Immunology

ISSN: 1471-2172

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