Insight into SNPs and epitopes of E protein of newly emerged genotype-I isolates of JEV from Midnapur, West Bengal, India

Table 1 List of domain specific mutations in E protein of GI isolates in reference (Ref) to GIII strains

Amino acids marked with ^bsign in 3P54 have been identified as mismatches between PDB and UNIPROT sequence (P27395)
All comparisons are made for first 406 residues of E protein (ecto domain). All three GI isolates of Midnapur/WB are taken with earlier Japan strain (Ishikawa). In GIII category, three sequences such as 3P54_A, virulent SA14 (ID M55506) and attenuated non-virulent SA14-14-2 (ID JN604986) are considered. + Sign indicates presence and dot indicates absence of mutations respectively. (+) indicates category of reported neurovirulent mutations [13]. Identical neurovirulent mutations of present isolates as SA14 are identified with^a sign

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