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Table 3 Longitudinal analyses of variations within the RV9 (Nef) epitope in seven patients

From: A longitudinal analysis of immune escapes from HLA-B*13-restricted T-cell responses at early stage of CRF01_AE subtype HIV-1 infection and implications for vaccine design

Patient

RQEILDLWV

Clone

Response

320019

   

58 dpi

………

16/17

1430

 

G…….

1/17

 

381dpi

………

1/9

640

 

.K……

8/9

 

320088

   

62 dpi

………

18/18

3240

327 dpi

………

9/12

2970

 

..G……

1/12

 
 

.R……

1/12

 
 

.K……

1/12

 

320135

   

63 dpi

..D……

21/21

240

427 dpi

..D……

13/13

420

325020

   

59 dpi

………

12/14

0

 

…..G…

1/14

 
 

..G……

1/14

 

309 dpi

………

14/14

640

320006

   

108 dpi

………

22/22

90

395 dpi

………

8/12

ND

 

……S.

2/12

 
 

K…….

1/12

 
 

..K….R

1/12

 

320018

   

58 dpi

………

24/24

4600

330 dpi

………

11/11

2980

440230

   

78 dpi

.RD……

17/18

ND

 

.RD…S.

1/18

 

318 dpi

.RD……

8/14

ND

 

.GD……

4/14

 
 

..D……

2/14

 
  1. Dpi, days post-infection; ND, not detected