Table 1 O. cubifrons orthologues identified in this study. Adaptive immunity-related genes are listed, together with the GenBank accession number for the O. cubifrons cDNA sequences assembled from RNA-seq data
From: A survey of the adaptive immune genes of the polka-dot batfish Ogcocephalus cubifrons
Gene | O. cubifrons cDNA accession # | T. rubripes orthologue as top hit? (E value)a |
|---|---|---|
aicda | OP856755 | yes (0.0) |
b2m1 | OP856756 | yes (5e-42) |
b2m2 | OP856757 | yes (6e-37) |
cd3e | OP856758 | yes (6e-38) |
cd3gd | OP856759 | yes (2e-35) |
cd3z | OP856760 | yes (4e-64) |
cd4.1 b | OP856761 | yes (3e-115) |
cd4.2 | OP856762 | yes (9e-78) |
cd8a | OP856763 | yes (7e-46) |
cd8b | OP856764 | yes (4e-58) |
cd74 | OP856765 | yes (4e-37) |
cd79a | OP856766 | yes (2e-63) |
cd79b | OP856767 | yes (2e-56) |
dntt | OP856768 | yes (0.0) |
ighd c | OP856769 | yes (0.0) |
Ighm c | OP856770 | yes (2e-172) |
lck | OP856771 | yes (0.0) |
mhc1 d | OP856772 | yes (5e-129) |
mhc2a | OP856773 | yes (1e-88) |
mhc2b e | OP856774 | yes (e3-103) |
polm | OQ476078 | yes (0.0) |
rag1 | OP856775 | yes (0.0) |
rag2 | OP856776 | yes (0.0) |
syk | OP856777 | yes (0.0) |
tap1 | OP856778 | yes (0.0) |
tap2 | OP856779 | yes (0.0) |
trac c | OP856780 | yes (4e-32) |
trbc c | OP856781 | yes (1e-68) |